Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC9□□□□□ -0.97
LINC01554Q52M75 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
LINC01554Q52M75 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
LINC01554Q52M75 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
LINC01554Q52M75 LINC02228-203ENST00000641970 1355 ntBASIC9□□□□□ -0.97
LINC01554Q52M75 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC9□□□□□ -0.97
LINC01554Q52M75 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC9□□□□□ -0.97
LINC01554Q52M75 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
LINC01554Q52M75 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 EFTUD1P1-204ENST00000560401 1798 ntBASIC9□□□□□ -0.97
LINC01554Q52M75 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 IRS3P-201ENST00000223076 1006 ntBASIC9□□□□□ -0.97
LINC01554Q52M75 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC9□□□□□ -0.97
LINC01554Q52M75 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 PGM5P4-201ENST00000421970 445 ntBASIC9□□□□□ -0.97
LINC01554Q52M75 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC9□□□□□ -0.97
LINC01554Q52M75 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 TMEM179-206ENST00000616017 1645 ntBASIC9□□□□□ -0.97
LINC01554Q52M75 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
LINC01554Q52M75 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
LINC01554Q52M75 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 MYO15B-237ENST00000642007 4893 ntBASIC9□□□□□ -0.97
LINC01554Q52M75 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 MOK-225ENST00000522867 1883 ntTSL 5 BASIC9□□□□□ -0.97
LINC01554Q52M75 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC9□□□□□ -0.97
LINC01554Q52M75 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01554Q52M75 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
LINC01554Q52M75 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01554Q52M75 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC8.99□□□□□ -0.97
LINC01554Q52M75 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01554Q52M75 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC8.99□□□□□ -0.97
LINC01554Q52M75 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01554Q52M75 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC8.99□□□□□ -0.97
LINC01554Q52M75 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01554Q52M75 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01554Q52M75 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01554Q52M75 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
LINC01554Q52M75 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01554Q52M75 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
LINC01554Q52M75 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01554Q52M75 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
LINC01554Q52M75 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms