Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDE1AP54750 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE1AP54750 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE1AP54750 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PDE1AP54750 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE1AP54750 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.77■■□□□ 1.08
PDE1AP54750 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 KRT18P35-201ENST00000510488 1269 ntBASIC21.77■■□□□ 1.08
PDE1AP54750 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.77■■□□□ 1.08
PDE1AP54750 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
PDE1AP54750 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.77■■□□□ 1.08
PDE1AP54750 AC010460.3-201ENST00000511359 1579 ntBASIC21.77■■□□□ 1.08
PDE1AP54750 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDE1AP54750 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PDE1AP54750 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.77■■□□□ 1.07
PDE1AP54750 AC097374.2-201ENST00000618617 1306 ntBASIC21.77■■□□□ 1.07
PDE1AP54750 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PDE1AP54750 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PDE1AP54750 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PDE1AP54750 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.76■■□□□ 1.07
PDE1AP54750 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 AL645608.8-201ENST00000606034 2086 ntBASIC21.76■■□□□ 1.07
PDE1AP54750 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
PDE1AP54750 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.76■■□□□ 1.07
PDE1AP54750 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.76■■□□□ 1.07
PDE1AP54750 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
PDE1AP54750 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PDE1AP54750 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.76■■□□□ 1.07
PDE1AP54750 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 AC005336.2-201ENST00000593183 939 ntBASIC21.76■■□□□ 1.07
PDE1AP54750 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.76■■□□□ 1.07
PDE1AP54750 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
PDE1AP54750 IGHV3-41-201ENST00000613121 348 ntBASIC21.76■■□□□ 1.07
PDE1AP54750 LINC01451-201ENST00000623792 534 ntBASIC21.76■■□□□ 1.07
PDE1AP54750 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.76■■□□□ 1.07
PDE1AP54750 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PDE1AP54750 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.76■■□□□ 1.07
PDE1AP54750 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDE1AP54750 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
PDE1AP54750 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE1AP54750 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE1AP54750 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PDE1AP54750 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PDE1AP54750 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PDE1AP54750 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE1AP54750 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE1AP54750 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE1AP54750 BX276092.7-203ENST00000637198 1536 ntBASIC21.75■■□□□ 1.07
PDE1AP54750 AC141586.5-201ENST00000624546 2050 ntBASIC21.75■■□□□ 1.07
PDE1AP54750 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDE1AP54750 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE1AP54750 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.75■■□□□ 1.07
PDE1AP54750 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE1AP54750 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE1AP54750 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE1AP54750 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDE1AP54750 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDE1AP54750 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.74■■□□□ 1.07
PDE1AP54750 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms