Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
USP11P51784 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.16■□□□□ 0.82
USP11P51784 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.16■□□□□ 0.82
USP11P51784 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP11P51784 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.15■□□□□ 0.82
USP11P51784 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP11P51784 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.15■□□□□ 0.82
USP11P51784 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP11P51784 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP11P51784 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.15■□□□□ 0.82
USP11P51784 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.15■□□□□ 0.82
USP11P51784 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.15■□□□□ 0.82
USP11P51784 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.15■□□□□ 0.82
USP11P51784 KRT126P-201ENST00000549467 1181 ntBASIC20.15■□□□□ 0.82
USP11P51784 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.15■□□□□ 0.82
USP11P51784 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.15■□□□□ 0.82
USP11P51784 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.15■□□□□ 0.82
USP11P51784 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.15■□□□□ 0.82
USP11P51784 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP11P51784 AL591684.3-201ENST00000605187 298 ntBASIC20.15■□□□□ 0.82
USP11P51784 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP11P51784 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.15■□□□□ 0.82
USP11P51784 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.15■□□□□ 0.82
USP11P51784 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP11P51784 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.15■□□□□ 0.82
USP11P51784 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.15■□□□□ 0.82
USP11P51784 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.15■□□□□ 0.82
USP11P51784 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP11P51784 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP11P51784 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.15■□□□□ 0.82
USP11P51784 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.15■□□□□ 0.82
USP11P51784 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP11P51784 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP11P51784 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP11P51784 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP11P51784 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
USP11P51784 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
USP11P51784 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
USP11P51784 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP11P51784 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
USP11P51784 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
USP11P51784 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.14■□□□□ 0.81
USP11P51784 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
USP11P51784 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.14■□□□□ 0.81
USP11P51784 AC020763.4-201ENST00000623414 4170 ntBASIC20.14■□□□□ 0.81
USP11P51784 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
USP11P51784 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP11P51784 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP11P51784 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
USP11P51784 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP11P51784 AC103564.2-201ENST00000432853 1299 ntBASIC20.14■□□□□ 0.81
USP11P51784 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP11P51784 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.14■□□□□ 0.81
USP11P51784 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.14■□□□□ 0.81
USP11P51784 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP11P51784 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
USP11P51784 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.14■□□□□ 0.81
USP11P51784 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP11P51784 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.14■□□□□ 0.81
USP11P51784 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP11P51784 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.14■□□□□ 0.81
USP11P51784 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP11P51784 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.14■□□□□ 0.81
USP11P51784 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.14■□□□□ 0.81
USP11P51784 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
USP11P51784 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP11P51784 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP11P51784 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
USP11P51784 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP11P51784 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP11P51784 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP11P51784 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.13■□□□□ 0.81
USP11P51784 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP11P51784 AL450487.1-201ENST00000426799 995 ntBASIC20.13■□□□□ 0.81
USP11P51784 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.13■□□□□ 0.81
USP11P51784 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.13■□□□□ 0.81
USP11P51784 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.13■□□□□ 0.81
USP11P51784 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.13■□□□□ 0.81
USP11P51784 AL732292.2-201ENST00000609649 430 ntBASIC20.13■□□□□ 0.81
USP11P51784 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.13■□□□□ 0.81
USP11P51784 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
USP11P51784 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP11P51784 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP11P51784 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP11P51784 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP11P51784 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP11P51784 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
USP11P51784 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.12■□□□□ 0.81
USP11P51784 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
USP11P51784 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
USP11P51784 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms