Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
PCP4P48539 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 AC027020.2-201ENST00000602585 2389 ntBASIC12.23□□□□□ -0.45
PCP4P48539 TCAF1P1-201ENST00000414990 2232 ntBASIC12.23□□□□□ -0.45
PCP4P48539 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.23□□□□□ -0.45
PCP4P48539 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.23□□□□□ -0.45
PCP4P48539 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PCP4P48539 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.23□□□□□ -0.45
PCP4P48539 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.23□□□□□ -0.45
PCP4P48539 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCP4P48539 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
PCP4P48539 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.22□□□□□ -0.45
PCP4P48539 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.22□□□□□ -0.45
PCP4P48539 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.22□□□□□ -0.45
PCP4P48539 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PCP4P48539 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
PCP4P48539 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 AC092068.3-201ENST00000587894 2016 ntBASIC12.22□□□□□ -0.45
PCP4P48539 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.22□□□□□ -0.45
PCP4P48539 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.22□□□□□ -0.45
PCP4P48539 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
PCP4P48539 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
PCP4P48539 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
PCP4P48539 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
PCP4P48539 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
PCP4P48539 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
PCP4P48539 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.22□□□□□ -0.45
PCP4P48539 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PCP4P48539 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PCP4P48539 AL365203.3-201ENST00000609742 2057 ntBASIC12.22□□□□□ -0.45
PCP4P48539 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCP4P48539 AC099521.2-201ENST00000619354 2036 ntBASIC12.21□□□□□ -0.45
PCP4P48539 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.21□□□□□ -0.45
PCP4P48539 AL512353.2-201ENST00000448759 1962 ntBASIC12.21□□□□□ -0.45
PCP4P48539 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
PCP4P48539 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.21□□□□□ -0.45
PCP4P48539 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.21□□□□□ -0.45
PCP4P48539 AC006504.5-208ENST00000588784 2401 ntBASIC12.21□□□□□ -0.45
PCP4P48539 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
PCP4P48539 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.21□□□□□ -0.45
PCP4P48539 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.21□□□□□ -0.45
PCP4P48539 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PCP4P48539 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
PCP4P48539 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 AL118506.1-201ENST00000601296 3082 ntBASIC12.21□□□□□ -0.45
PCP4P48539 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.21□□□□□ -0.45
PCP4P48539 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCP4P48539 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCP4P48539 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.21□□□□□ -0.46
PCP4P48539 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PCP4P48539 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCP4P48539 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
PCP4P48539 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCP4P48539 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PCP4P48539 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.21□□□□□ -0.46
PCP4P48539 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms