Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
THBS1P07996 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.45■□□□□ 0.22
THBS1P07996 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.44■□□□□ 0.22
THBS1P07996 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
THBS1P07996 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.44■□□□□ 0.22
THBS1P07996 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
THBS1P07996 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
THBS1P07996 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.44■□□□□ 0.22
THBS1P07996 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 HBZP1-201ENST00000354915 429 ntBASIC16.44■□□□□ 0.22
THBS1P07996 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.44■□□□□ 0.22
THBS1P07996 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.44■□□□□ 0.22
THBS1P07996 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.44■□□□□ 0.22
THBS1P07996 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
THBS1P07996 AC112698.1-201ENST00000510299 916 ntBASIC16.44■□□□□ 0.22
THBS1P07996 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.44■□□□□ 0.22
THBS1P07996 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.44■□□□□ 0.22
THBS1P07996 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.44■□□□□ 0.22
THBS1P07996 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
THBS1P07996 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
THBS1P07996 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
THBS1P07996 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
THBS1P07996 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
THBS1P07996 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
THBS1P07996 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.43■□□□□ 0.22
THBS1P07996 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
THBS1P07996 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
THBS1P07996 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.43■□□□□ 0.22
THBS1P07996 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.43■□□□□ 0.22
THBS1P07996 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.43■□□□□ 0.22
THBS1P07996 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.43■□□□□ 0.22
THBS1P07996 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.43■□□□□ 0.22
THBS1P07996 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.43■□□□□ 0.22
THBS1P07996 GPR32P1-201ENST00000601788 811 ntBASIC16.43■□□□□ 0.22
THBS1P07996 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.43■□□□□ 0.22
THBS1P07996 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.43■□□□□ 0.22
THBS1P07996 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
THBS1P07996 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.43■□□□□ 0.22
THBS1P07996 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
THBS1P07996 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 AL353692.3-201ENST00000407031 1396 ntBASIC16.42■□□□□ 0.22
THBS1P07996 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
THBS1P07996 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
THBS1P07996 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
THBS1P07996 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
THBS1P07996 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
THBS1P07996 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 AK4P3-201ENST00000418260 669 ntBASIC16.42■□□□□ 0.22
THBS1P07996 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 KRT18P38-201ENST00000449496 1282 ntBASIC16.42■□□□□ 0.22
THBS1P07996 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.42■□□□□ 0.22
THBS1P07996 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.42■□□□□ 0.22
THBS1P07996 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 AC022616.7-201ENST00000525383 220 ntBASIC16.42■□□□□ 0.22
THBS1P07996 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.42■□□□□ 0.22
THBS1P07996 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.42■□□□□ 0.22
THBS1P07996 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.42■□□□□ 0.22
THBS1P07996 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
THBS1P07996 AL645608.8-201ENST00000606034 2086 ntBASIC16.42■□□□□ 0.22
THBS1P07996 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.42■□□□□ 0.22
THBS1P07996 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms