Protein–RNA interactions for Protein: O95754

SEMA4F, Semaphorin-4F, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4FO95754 AC040169.1-201ENST00000565382 521 ntBASIC17.6■□□□□ 0.41
SEMA4FO95754 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.6■□□□□ 0.41
SEMA4FO95754 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.6■□□□□ 0.41
SEMA4FO95754 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4FO95754 AL589182.2-201ENST00000619332 1049 ntBASIC17.6■□□□□ 0.41
SEMA4FO95754 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.6■□□□□ 0.41
SEMA4FO95754 AL353593.2-201ENST00000602529 1483 ntBASIC17.6■□□□□ 0.41
SEMA4FO95754 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4FO95754 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4FO95754 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4FO95754 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4FO95754 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4FO95754 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SEMA4FO95754 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4FO95754 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4FO95754 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4FO95754 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4FO95754 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SEMA4FO95754 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.6■□□□□ 0.41
SEMA4FO95754 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.6■□□□□ 0.41
SEMA4FO95754 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.6■□□□□ 0.41
SEMA4FO95754 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.59■□□□□ 0.41
SEMA4FO95754 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SEMA4FO95754 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
SEMA4FO95754 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.59■□□□□ 0.41
SEMA4FO95754 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.59■□□□□ 0.41
SEMA4FO95754 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.59■□□□□ 0.41
SEMA4FO95754 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.59■□□□□ 0.41
SEMA4FO95754 AC073621.1-201ENST00000392730 636 ntBASIC17.59■□□□□ 0.41
SEMA4FO95754 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.59■□□□□ 0.41
SEMA4FO95754 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.59■□□□□ 0.41
SEMA4FO95754 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.59■□□□□ 0.41
SEMA4FO95754 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.59■□□□□ 0.41
SEMA4FO95754 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.59■□□□□ 0.41
SEMA4FO95754 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.59■□□□□ 0.41
SEMA4FO95754 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.59■□□□□ 0.41
SEMA4FO95754 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.59■□□□□ 0.41
SEMA4FO95754 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEMA4FO95754 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SEMA4FO95754 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.58■□□□□ 0.41
SEMA4FO95754 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SEMA4FO95754 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SEMA4FO95754 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SEMA4FO95754 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SEMA4FO95754 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SEMA4FO95754 AL049757.1-201ENST00000616842 1596 ntBASIC17.58■□□□□ 0.41
SEMA4FO95754 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SEMA4FO95754 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4FO95754 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4FO95754 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4FO95754 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SEMA4FO95754 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4FO95754 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4FO95754 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4FO95754 KLF4P1-201ENST00000412782 1185 ntBASIC17.58■□□□□ 0.4
SEMA4FO95754 UPF3AP3-201ENST00000420996 769 ntBASIC17.58■□□□□ 0.4
SEMA4FO95754 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.58■□□□□ 0.4
SEMA4FO95754 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.58■□□□□ 0.4
SEMA4FO95754 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4FO95754 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SEMA4FO95754 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.58■□□□□ 0.4
SEMA4FO95754 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.58■□□□□ 0.4
SEMA4FO95754 AC010327.4-202ENST00000591484 748 ntBASIC17.58■□□□□ 0.4
SEMA4FO95754 AC116407.2-201ENST00000613639 860 ntBASIC17.58■□□□□ 0.4
SEMA4FO95754 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.58■□□□□ 0.4
SEMA4FO95754 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.58■□□□□ 0.4
SEMA4FO95754 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4FO95754 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SEMA4FO95754 BCL2-203ENST00000589955 5011 ntBASIC17.58■□□□□ 0.4
SEMA4FO95754 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.58■□□□□ 0.4
SEMA4FO95754 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4FO95754 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4FO95754 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SEMA4FO95754 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEMA4FO95754 WIZP1-201ENST00000531444 2299 ntBASIC17.58■□□□□ 0.4
SEMA4FO95754 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SEMA4FO95754 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SEMA4FO95754 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.57■□□□□ 0.4
SEMA4FO95754 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms