Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CTNND1O60716 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 AC108751.1-201ENST00000490852 363 ntBASIC20.78■□□□□ 0.92
CTNND1O60716 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNND1O60716 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNND1O60716 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CTNND1O60716 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CTNND1O60716 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CTNND1O60716 AL049757.1-201ENST00000616842 1596 ntBASIC20.77■□□□□ 0.92
CTNND1O60716 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.77■□□□□ 0.92
CTNND1O60716 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.77■□□□□ 0.92
CTNND1O60716 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.77■□□□□ 0.92
CTNND1O60716 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.77■□□□□ 0.92
CTNND1O60716 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.77■□□□□ 0.92
CTNND1O60716 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.77■□□□□ 0.92
CTNND1O60716 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.77■□□□□ 0.92
CTNND1O60716 AP001160.2-201ENST00000596071 487 ntBASIC20.77■□□□□ 0.92
CTNND1O60716 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.77■□□□□ 0.92
CTNND1O60716 AC064836.3-201ENST00000607928 673 ntBASIC20.77■□□□□ 0.92
CTNND1O60716 AC004706.3-202ENST00000621574 984 ntBASIC20.77■□□□□ 0.92
CTNND1O60716 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.77■□□□□ 0.92
CTNND1O60716 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CTNND1O60716 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNND1O60716 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.77■□□□□ 0.92
CTNND1O60716 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTNND1O60716 SIRPAP1-201ENST00000448467 1770 ntBASIC20.77■□□□□ 0.91
CTNND1O60716 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CTNND1O60716 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.76■□□□□ 0.91
CTNND1O60716 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CTNND1O60716 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 AC023274.1-201ENST00000418278 595 ntBASIC20.76■□□□□ 0.91
CTNND1O60716 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 MTDHP5-201ENST00000598980 586 ntBASIC20.76■□□□□ 0.91
CTNND1O60716 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CTNND1O60716 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.76■□□□□ 0.91
CTNND1O60716 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 CROCCP3-202ENST00000420820 1947 ntBASIC20.76■□□□□ 0.91
CTNND1O60716 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.76■□□□□ 0.91
CTNND1O60716 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNND1O60716 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.75■□□□□ 0.91
CTNND1O60716 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTNND1O60716 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CTNND1O60716 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.75■□□□□ 0.91
CTNND1O60716 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.75■□□□□ 0.91
CTNND1O60716 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTNND1O60716 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CTNND1O60716 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTNND1O60716 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.75■□□□□ 0.91
CTNND1O60716 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CTNND1O60716 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.75■□□□□ 0.91
CTNND1O60716 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.75■□□□□ 0.91
CTNND1O60716 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.75■□□□□ 0.91
CTNND1O60716 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.75■□□□□ 0.91
CTNND1O60716 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
CTNND1O60716 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTNND1O60716 AC079781.4-201ENST00000641908 219 ntBASIC20.75■□□□□ 0.91
CTNND1O60716 AC132938.5-201ENST00000624980 1813 ntBASIC20.75■□□□□ 0.91
CTNND1O60716 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CTNND1O60716 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.75■□□□□ 0.91
CTNND1O60716 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNND1O60716 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
CTNND1O60716 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CTNND1O60716 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.74■□□□□ 0.91
CTNND1O60716 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTNND1O60716 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms