Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.1■□□□□ 0.17
CCRL2O00421 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCRL2O00421 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCRL2O00421 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CCRL2O00421 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCRL2O00421 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCRL2O00421 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCRL2O00421 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCRL2O00421 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
CCRL2O00421 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.09■□□□□ 0.17
CCRL2O00421 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCRL2O00421 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.09■□□□□ 0.17
CCRL2O00421 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.09■□□□□ 0.17
CCRL2O00421 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
CCRL2O00421 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCRL2O00421 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.09■□□□□ 0.17
CCRL2O00421 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.09■□□□□ 0.17
CCRL2O00421 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.09■□□□□ 0.17
CCRL2O00421 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.09■□□□□ 0.17
CCRL2O00421 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCRL2O00421 DOC2GP-204ENST00000639052 2548 ntBASIC16.09■□□□□ 0.17
CCRL2O00421 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCRL2O00421 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCRL2O00421 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.09■□□□□ 0.17
CCRL2O00421 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCRL2O00421 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCRL2O00421 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CCRL2O00421 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCRL2O00421 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCRL2O00421 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.08■□□□□ 0.17
CCRL2O00421 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.08■□□□□ 0.17
CCRL2O00421 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.08■□□□□ 0.16
CCRL2O00421 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCRL2O00421 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCRL2O00421 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 MIR149-201ENST00000384879 89 ntBASIC16.08■□□□□ 0.16
CCRL2O00421 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.08■□□□□ 0.16
CCRL2O00421 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.08■□□□□ 0.16
CCRL2O00421 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.08■□□□□ 0.16
CCRL2O00421 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.08■□□□□ 0.16
CCRL2O00421 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 NFIC-211ENST00000641145 8399 ntBASIC16.08■□□□□ 0.16
CCRL2O00421 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCRL2O00421 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.08■□□□□ 0.16
CCRL2O00421 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.08■□□□□ 0.16
CCRL2O00421 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCRL2O00421 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.07■□□□□ 0.16
CCRL2O00421 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.07■□□□□ 0.16
CCRL2O00421 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CCRL2O00421 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.07■□□□□ 0.16
CCRL2O00421 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.07■□□□□ 0.16
CCRL2O00421 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 PKD1P5-201ENST00000532415 10291 ntBASIC16.07■□□□□ 0.16
CCRL2O00421 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.07■□□□□ 0.16
CCRL2O00421 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.07■□□□□ 0.16
CCRL2O00421 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCRL2O00421 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.07■□□□□ 0.16
CCRL2O00421 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.07■□□□□ 0.16
CCRL2O00421 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms