Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 DBP-204ENST00000599385 709 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 AC024243.1-201ENST00000609234 778 ntBASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB3Q9Y5G1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 AL031133.1-201ENST00000406807 723 ntBASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 SEC1P-202ENST00000473944 940 ntBASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 AL121956.5-201ENST00000625261 221 ntBASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB3Q9Y5G1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 AL645608.8-201ENST00000606034 2086 ntBASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 PHGDH-209ENST00000641074 1780 ntBASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 AC034232.1-201ENST00000506026 1064 ntBASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGB3Q9Y5G1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms