Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SMC3Q9UQE7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.02■□□□□ 0.95
SMC3Q9UQE7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 ECEL1P3-201ENST00000427961 737 ntBASIC21.01■□□□□ 0.95
SMC3Q9UQE7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
SMC3Q9UQE7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMC3Q9UQE7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMC3Q9UQE7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMC3Q9UQE7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21■□□□□ 0.95
SMC3Q9UQE7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SMC3Q9UQE7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21■□□□□ 0.95
SMC3Q9UQE7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SMC3Q9UQE7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21■□□□□ 0.95
SMC3Q9UQE7 AP000523.1-201ENST00000398242 1049 ntBASIC21■□□□□ 0.95
SMC3Q9UQE7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21■□□□□ 0.95
SMC3Q9UQE7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMC3Q9UQE7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21■□□□□ 0.95
SMC3Q9UQE7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21■□□□□ 0.95
SMC3Q9UQE7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21■□□□□ 0.95
SMC3Q9UQE7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21■□□□□ 0.95
SMC3Q9UQE7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMC3Q9UQE7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21■□□□□ 0.95
SMC3Q9UQE7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 AL138688.1-201ENST00000624851 1594 ntBASIC20.99■□□□□ 0.95
SMC3Q9UQE7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.99■□□□□ 0.95
SMC3Q9UQE7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SMC3Q9UQE7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms