Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 AC007064.4-201ENST00000637740 555 ntBASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
ZC3H4Q9UPT8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ZC3H4Q9UPT8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ZC3H4Q9UPT8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZC3H4Q9UPT8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.52■■□□□ 1.03
ZC3H4Q9UPT8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZC3H4Q9UPT8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 AC093520.2-201ENST00000561830 333 ntBASIC21.51■■□□□ 1.03
ZC3H4Q9UPT8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 MYLKP1-201ENST00000509077 1580 ntBASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 INGX-202ENST00000489074 768 ntBASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 AC093214.1-201ENST00000511688 1107 ntBASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 AC023141.13-201ENST00000604991 943 ntBASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 AC009093.7-201ENST00000623853 1223 ntBASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 AC116562.4-201ENST00000641316 2276 ntBASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZC3H4Q9UPT8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 AC007274.1-201ENST00000439805 662 ntBASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms