Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.99■□□□□ 0.63
PCDHB8Q9UN66 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB8Q9UN66 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 AC018712.1-201ENST00000455767 687 ntBASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 RNPS1P1-201ENST00000507437 918 ntBASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 AC073648.2-201ENST00000510116 352 ntBASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 ACTG1P22-201ENST00000603793 1099 ntBASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 AC148477.8-201ENST00000624298 468 ntBASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 AC092723.2-201ENST00000624955 793 ntBASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 AP000867.4-201ENST00000641616 219 ntBASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB8Q9UN66 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 AL031284.1-201ENST00000419297 478 ntBASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 AP000347.1-202ENST00000435868 847 ntBASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB8Q9UN66 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 COX5BP2-201ENST00000392354 334 ntBASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 SART3-203ENST00000546611 1184 ntBASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 AL136370.1-201ENST00000608166 691 ntBASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 AC090164.3-201ENST00000610780 2143 ntBASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHB8Q9UN66 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms