Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 AC008556.1-201ENST00000610908 2040 ntBASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
C12orf4Q9NQ89 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 AC011676.5-201ENST00000624864 2660 ntBASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 RPS2P4-201ENST00000476944 856 ntBASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 RN7SL471P-201ENST00000580476 299 ntBASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 AL031985.4-201ENST00000642138 673 ntBASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 AC063926.3-201ENST00000624734 5658 ntBASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 AL109659.2-201ENST00000606809 1674 ntBASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.59■□□□□ 0.09
C12orf4Q9NQ89 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 AC023824.1-201ENST00000562945 2975 ntBASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
C12orf4Q9NQ89 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 KRT18P41-201ENST00000518924 1277 ntBASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 GNAS-203ENST00000306120 1878 ntBASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
C12orf4Q9NQ89 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms