Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 TMPOP1-202ENST00000424642 1267 ntBASIC15.14■□□□□ 0.01
HES4Q9HCC6 SPDYE13P-201ENST00000445314 798 ntBASIC15.14■□□□□ 0.01
HES4Q9HCC6 AP003733.1-201ENST00000491725 852 ntBASIC15.14■□□□□ 0.01
HES4Q9HCC6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 VENTXP5-201ENST00000523979 775 ntBASIC15.14■□□□□ 0.01
HES4Q9HCC6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 AC009154.2-201ENST00000621177 724 ntBASIC15.14■□□□□ 0.01
HES4Q9HCC6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.14■□□□□ 0.01
HES4Q9HCC6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HES4Q9HCC6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 LINC01238-205ENST00000567549 1107 ntBASIC15.13■□□□□ 0.01
HES4Q9HCC6 GPR32P1-201ENST00000601788 811 ntBASIC15.13■□□□□ 0.01
HES4Q9HCC6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 AC083849.1-201ENST00000615227 514 ntBASIC15.13■□□□□ 0.01
HES4Q9HCC6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HES4Q9HCC6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HES4Q9HCC6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HES4Q9HCC6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HES4Q9HCC6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms