Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 MTDHP4-201ENST00000600287 670 ntBASIC20.77■□□□□ 0.92
EFCC1Q9HA90 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EFCC1Q9HA90 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
EFCC1Q9HA90 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.77■□□□□ 0.91
EFCC1Q9HA90 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
EFCC1Q9HA90 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
EFCC1Q9HA90 MYLKP1-201ENST00000509077 1580 ntBASIC20.76■□□□□ 0.91
EFCC1Q9HA90 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 LINC00602-201ENST00000629776 2065 ntBASIC20.76■□□□□ 0.91
EFCC1Q9HA90 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.76■□□□□ 0.91
EFCC1Q9HA90 AL035633.1-201ENST00000406139 838 ntBASIC20.76■□□□□ 0.91
EFCC1Q9HA90 AL645939.2-201ENST00000427340 991 ntBASIC20.76■□□□□ 0.91
EFCC1Q9HA90 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 AC009154.2-201ENST00000621177 724 ntBASIC20.76■□□□□ 0.91
EFCC1Q9HA90 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 AC116562.4-201ENST00000641316 2276 ntBASIC20.76■□□□□ 0.91
EFCC1Q9HA90 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFCC1Q9HA90 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 NKAPP1-205ENST00000585790 367 ntBASIC20.75■□□□□ 0.91
EFCC1Q9HA90 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 AC125634.1-201ENST00000438758 1403 ntBASIC20.75■□□□□ 0.91
EFCC1Q9HA90 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EFCC1Q9HA90 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 MCCD1P2-201ENST00000423228 335 ntBASIC20.74■□□□□ 0.91
EFCC1Q9HA90 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 AC007613.1-201ENST00000572811 2597 ntBASIC20.74■□□□□ 0.91
EFCC1Q9HA90 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFCC1Q9HA90 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EFCC1Q9HA90 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EFCC1Q9HA90 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.73■□□□□ 0.91
EFCC1Q9HA90 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
EFCC1Q9HA90 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
EFCC1Q9HA90 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EFCC1Q9HA90 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.73■□□□□ 0.91
EFCC1Q9HA90 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EFCC1Q9HA90 AC254562.1-201ENST00000417586 456 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms