Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF41Q9H4P4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF41Q9H4P4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RNF41Q9H4P4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF41Q9H4P4 TP73-AS1-210ENST00000637775 1455 ntBASIC21.07■□□□□ 0.96
RNF41Q9H4P4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 AC011467.2-201ENST00000598425 242 ntBASIC21.06■□□□□ 0.96
RNF41Q9H4P4 AC114341.1-201ENST00000618070 349 ntBASIC21.06■□□□□ 0.96
RNF41Q9H4P4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
RNF41Q9H4P4 AC009949.1-201ENST00000623048 1830 ntBASIC21.06■□□□□ 0.96
RNF41Q9H4P4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 AC007967.3-201ENST00000434308 558 ntBASIC21.05■□□□□ 0.96
RNF41Q9H4P4 FOSL1P1-201ENST00000511041 816 ntBASIC21.05■□□□□ 0.96
RNF41Q9H4P4 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 AC138894.3-201ENST00000603787 634 ntBASIC21.05■□□□□ 0.96
RNF41Q9H4P4 AL121772.3-201ENST00000610840 674 ntBASIC21.05■□□□□ 0.96
RNF41Q9H4P4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF41Q9H4P4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 FAM220CP-201ENST00000395253 831 ntBASIC21.04■□□□□ 0.96
RNF41Q9H4P4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 KRT16P4-201ENST00000453883 522 ntBASIC21.04■□□□□ 0.96
RNF41Q9H4P4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF41Q9H4P4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms