Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRIM62Q9BVG3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 FAM220CP-201ENST00000395253 831 ntBASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 KRT18P56-201ENST00000507275 550 ntBASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 AL121772.3-201ENST00000610840 674 ntBASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 AC114341.1-201ENST00000618070 349 ntBASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIM62Q9BVG3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 AC011467.2-201ENST00000598425 242 ntBASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 AC099336.1-202ENST00000602961 463 ntBASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 AC100803.2-201ENST00000562459 1963 ntBASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRIM62Q9BVG3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 AC091607.1-201ENST00000490318 1060 ntBASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 AC122714.2-201ENST00000502787 707 ntBASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 AC096582.2-201ENST00000510860 516 ntBASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms