Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM11Q96F44 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRIM11Q96F44 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 AC005521.1-201ENST00000393351 872 ntBASIC18.92■□□□□ 0.62
TRIM11Q96F44 RNF152P1-201ENST00000397754 604 ntBASIC18.92■□□□□ 0.62
TRIM11Q96F44 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM11Q96F44 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.92■□□□□ 0.62
TRIM11Q96F44 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM11Q96F44 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM11Q96F44 LINC01451-201ENST00000623792 534 ntBASIC18.92■□□□□ 0.62
TRIM11Q96F44 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.92■□□□□ 0.62
TRIM11Q96F44 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TRIM11Q96F44 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 AL138688.1-201ENST00000624851 1594 ntBASIC18.92■□□□□ 0.62
TRIM11Q96F44 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM11Q96F44 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM11Q96F44 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 AP003733.1-201ENST00000491725 852 ntBASIC18.91■□□□□ 0.62
TRIM11Q96F44 ZNF444P1-201ENST00000559497 298 ntBASIC18.91■□□□□ 0.62
TRIM11Q96F44 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM11Q96F44 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM11Q96F44 AC009949.1-201ENST00000623048 1830 ntBASIC18.9■□□□□ 0.62
TRIM11Q96F44 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM11Q96F44 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TRIM11Q96F44 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM11Q96F44 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM11Q96F44 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM11Q96F44 HLA-J-201ENST00000462773 1622 ntBASIC18.9■□□□□ 0.62
TRIM11Q96F44 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM11Q96F44 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM11Q96F44 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM11Q96F44 IGHGP-201ENST00000390555 1178 ntBASIC18.9■□□□□ 0.62
TRIM11Q96F44 TSPY5P-201ENST00000426936 936 ntBASIC18.9■□□□□ 0.62
TRIM11Q96F44 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM11Q96F44 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM11Q96F44 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM11Q96F44 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM11Q96F44 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.9■□□□□ 0.62
TRIM11Q96F44 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM11Q96F44 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM11Q96F44 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM11Q96F44 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM11Q96F44 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM11Q96F44 KRT8P47-201ENST00000604727 1398 ntBASIC18.9■□□□□ 0.62
TRIM11Q96F44 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM11Q96F44 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM11Q96F44 LINC00304-203ENST00000565008 1864 ntBASIC18.9■□□□□ 0.62
TRIM11Q96F44 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM11Q96F44 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM11Q96F44 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
TRIM11Q96F44 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM11Q96F44 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
TRIM11Q96F44 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 MIR662-201ENST00000384847 95 ntBASIC18.89■□□□□ 0.61
TRIM11Q96F44 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM11Q96F44 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms