Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GRAMD1AQ96CP6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.37■□□□□ 0.53
GRAMD1AQ96CP6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GRAMD1AQ96CP6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRAMD1AQ96CP6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRAMD1AQ96CP6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRAMD1AQ96CP6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRAMD1AQ96CP6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GRAMD1AQ96CP6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GRAMD1AQ96CP6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 HCG4P8-203ENST00000443049 980 ntBASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 ZNF444P1-201ENST00000559497 298 ntBASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRAMD1AQ96CP6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 AL023806.1-201ENST00000603994 1649 ntBASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 AC093458.2-201ENST00000623150 629 ntBASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.35■□□□□ 0.53
GRAMD1AQ96CP6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 DUSP5P1-201ENST00000441325 1139 ntBASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRAMD1AQ96CP6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms