Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 AC106730.1-201ENST00000566722 1090 ntBASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 AL049757.1-201ENST00000616842 1596 ntBASIC21.14■□□□□ 0.98
SH3RF3Q8TEJ3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.14■□□□□ 0.98
SH3RF3Q8TEJ3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.14■□□□□ 0.98
SH3RF3Q8TEJ3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.14■□□□□ 0.98
SH3RF3Q8TEJ3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.14■□□□□ 0.98
SH3RF3Q8TEJ3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SH3RF3Q8TEJ3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SH3RF3Q8TEJ3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.14■□□□□ 0.98
SH3RF3Q8TEJ3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 IGHV3-22-201ENST00000520721 359 ntBASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 AC073592.4-201ENST00000623827 446 ntBASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 AC073592.5-201ENST00000624854 528 ntBASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SH3RF3Q8TEJ3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 SPDYE21P-201ENST00000413323 827 ntBASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 AC103564.2-201ENST00000432853 1299 ntBASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 AC092910.1-201ENST00000482027 1129 ntBASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 AC023511.2-201ENST00000618803 211 ntBASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 AC107918.4-202ENST00000641623 219 ntBASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.13■□□□□ 0.97
SH3RF3Q8TEJ3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 HLA-J-201ENST00000462773 1622 ntBASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 PMS2P1-201ENST00000431037 1228 ntBASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 AC019129.2-201ENST00000609837 1235 ntBASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 AC008735.5-201ENST00000623544 497 ntBASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 AP002414.3-201ENST00000589352 1468 ntBASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3RF3Q8TEJ3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH3RF3Q8TEJ3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms