Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 AC133963.1-201ENST00000504166 1679 ntBASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 TSPY12P-201ENST00000421279 868 ntBASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 KRT18P57-201ENST00000443599 1254 ntBASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 HOMER2P1-201ENST00000455653 964 ntBASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 AC092597.1-201ENST00000487352 616 ntBASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKL3Q8IVW4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 RNF152P1-201ENST00000397754 604 ntBASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 DDX43P3-201ENST00000441064 443 ntBASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 ZNF444P1-201ENST00000559497 298 ntBASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKL3Q8IVW4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 TSPY5P-201ENST00000426936 936 ntBASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 AP003733.1-201ENST00000491725 852 ntBASIC18.36■□□□□ 0.53
CDKL3Q8IVW4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms