Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 AC004408.2-201ENST00000623613 2777 ntBASIC19.29■□□□□ 0.68
HERC6Q8IVU3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HERC6Q8IVU3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 AC004817.3-201ENST00000602957 2129 ntBASIC19.28■□□□□ 0.68
HERC6Q8IVU3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.28■□□□□ 0.68
HERC6Q8IVU3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
HERC6Q8IVU3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.27■□□□□ 0.68
HERC6Q8IVU3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 HTR5BP-201ENST00000430851 1154 ntBASIC19.27■□□□□ 0.68
HERC6Q8IVU3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 AC092865.6-201ENST00000642101 219 ntBASIC19.27■□□□□ 0.68
HERC6Q8IVU3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERC6Q8IVU3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HERC6Q8IVU3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
HERC6Q8IVU3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
HERC6Q8IVU3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HERC6Q8IVU3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HERC6Q8IVU3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.27■□□□□ 0.67
HERC6Q8IVU3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HERC6Q8IVU3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HERC6Q8IVU3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 AL645939.2-201ENST00000427340 991 ntBASIC19.26■□□□□ 0.67
HERC6Q8IVU3 CNN2P11-201ENST00000429351 262 ntBASIC19.26■□□□□ 0.67
HERC6Q8IVU3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 C20orf181-201ENST00000623918 480 ntBASIC19.26■□□□□ 0.67
HERC6Q8IVU3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERC6Q8IVU3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERC6Q8IVU3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms