Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 AC112777.1-201ENST00000540175 1423 ntBASIC16.53■□□□□ 0.24
TUBA1AQ71U36 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 KRT18P22-201ENST00000402024 1347 ntBASIC16.53■□□□□ 0.24
TUBA1AQ71U36 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 SLC25A1P2-201ENST00000430693 912 ntBASIC16.53■□□□□ 0.24
TUBA1AQ71U36 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 AC007663.1-201ENST00000438948 1240 ntBASIC16.53■□□□□ 0.24
TUBA1AQ71U36 CCR12P-201ENST00000446203 998 ntBASIC16.53■□□□□ 0.24
TUBA1AQ71U36 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 AC012306.2-201ENST00000609350 630 ntBASIC16.53■□□□□ 0.24
TUBA1AQ71U36 AC008622.2-201ENST00000617006 1229 ntBASIC16.53■□□□□ 0.24
TUBA1AQ71U36 AC097493.4-201ENST00000641197 219 ntBASIC16.53■□□□□ 0.24
TUBA1AQ71U36 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 LINC00602-201ENST00000629776 2065 ntBASIC16.53■□□□□ 0.24
TUBA1AQ71U36 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBA1AQ71U36 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 AL162727.3-201ENST00000635661 2787 ntBASIC16.52■□□□□ 0.24
TUBA1AQ71U36 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 AC128688.1-201ENST00000487626 519 ntBASIC16.52■□□□□ 0.24
TUBA1AQ71U36 AP003041.3-201ENST00000527151 707 ntBASIC16.52■□□□□ 0.24
TUBA1AQ71U36 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 AL023803.3-201ENST00000615559 522 ntBASIC16.52■□□□□ 0.24
TUBA1AQ71U36 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBA1AQ71U36 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.52■□□□□ 0.23
TUBA1AQ71U36 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBA1AQ71U36 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.51■□□□□ 0.23
TUBA1AQ71U36 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 FAM87A-204ENST00000613235 858 ntBASIC16.51■□□□□ 0.23
TUBA1AQ71U36 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBA1AQ71U36 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms