Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 AC112698.1-201ENST00000510299 916 ntBASIC20.16■□□□□ 0.82
SHC4Q6S5L8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 AP001094.4-201ENST00000579008 2176 ntBASIC20.16■□□□□ 0.82
SHC4Q6S5L8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SHC4Q6S5L8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 RNF152P1-201ENST00000397754 604 ntBASIC20.15■□□□□ 0.82
SHC4Q6S5L8 FAM8A6P-201ENST00000407496 1135 ntBASIC20.15■□□□□ 0.82
SHC4Q6S5L8 TSPY12P-201ENST00000421279 868 ntBASIC20.15■□□□□ 0.82
SHC4Q6S5L8 AL359075.1-203ENST00000462729 1002 ntBASIC20.15■□□□□ 0.82
SHC4Q6S5L8 AP003733.1-201ENST00000491725 852 ntBASIC20.15■□□□□ 0.82
SHC4Q6S5L8 VENTXP5-201ENST00000523979 775 ntBASIC20.15■□□□□ 0.82
SHC4Q6S5L8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 LINC01451-201ENST00000623792 534 ntBASIC20.15■□□□□ 0.82
SHC4Q6S5L8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHC4Q6S5L8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SHC4Q6S5L8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SHC4Q6S5L8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.14■□□□□ 0.82
SHC4Q6S5L8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.14■□□□□ 0.82
SHC4Q6S5L8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 AL353692.3-201ENST00000407031 1396 ntBASIC20.14■□□□□ 0.81
SHC4Q6S5L8 SPDYE13P-201ENST00000445314 798 ntBASIC20.14■□□□□ 0.81
SHC4Q6S5L8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.14■□□□□ 0.81
SHC4Q6S5L8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHC4Q6S5L8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms