Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBWD3Q5JTY5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBWD3Q5JTY5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CBWD3Q5JTY5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBWD3Q5JTY5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBWD3Q5JTY5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CBWD3Q5JTY5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBWD3Q5JTY5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 AL845331.1-201ENST00000424978 1190 ntBASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 AC087388.1-201ENST00000571370 1112 ntBASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 LINC00304-203ENST00000565008 1864 ntBASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CBWD3Q5JTY5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 AL592071.1-201ENST00000611956 408 ntBASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 AC116407.2-201ENST00000613639 860 ntBASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 AC116407.4-201ENST00000623319 1061 ntBASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CBWD3Q5JTY5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 DDX43P3-201ENST00000441064 443 ntBASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 KRT18P35-201ENST00000510488 1269 ntBASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 KRT8P26-201ENST00000534154 1276 ntBASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.28■□□□□ 0.68
CBWD3Q5JTY5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CBWD3Q5JTY5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CBWD3Q5JTY5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CBWD3Q5JTY5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms