Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 TOB2P1-201ENST00000469761 992 ntBASIC19.11■□□□□ 0.65
MCCD1P59942 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.11■□□□□ 0.65
MCCD1P59942 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
MCCD1P59942 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
MCCD1P59942 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.11■□□□□ 0.65
MCCD1P59942 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.11■□□□□ 0.65
MCCD1P59942 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MCCD1P59942 Z69720.1-201ENST00000601483 472 ntBASIC19.11■□□□□ 0.65
MCCD1P59942 AL139327.4-201ENST00000612362 153 ntBASIC19.11■□□□□ 0.65
MCCD1P59942 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.11■□□□□ 0.65
MCCD1P59942 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MCCD1P59942 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.11■□□□□ 0.65
MCCD1P59942 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MCCD1P59942 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MCCD1P59942 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MCCD1P59942 NSUN5P1-202ENST00000421140 1535 ntBASIC19.1■□□□□ 0.65
MCCD1P59942 NSUN5P2-203ENST00000457352 1529 ntBASIC19.1■□□□□ 0.65
MCCD1P59942 AL645608.8-201ENST00000606034 2086 ntBASIC19.1■□□□□ 0.65
MCCD1P59942 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MCCD1P59942 TP73-AS1-210ENST00000637775 1455 ntBASIC19.1■□□□□ 0.65
MCCD1P59942 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
MCCD1P59942 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.1■□□□□ 0.65
MCCD1P59942 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MCCD1P59942 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MCCD1P59942 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.1■□□□□ 0.65
MCCD1P59942 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.1■□□□□ 0.65
MCCD1P59942 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
MCCD1P59942 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.1■□□□□ 0.65
MCCD1P59942 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.1■□□□□ 0.65
MCCD1P59942 VENTXP7-201ENST00000475503 772 ntBASIC19.1■□□□□ 0.65
MCCD1P59942 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.1■□□□□ 0.65
MCCD1P59942 AC012615.1-201ENST00000565797 1299 ntBASIC19.1■□□□□ 0.65
MCCD1P59942 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.1■□□□□ 0.65
MCCD1P59942 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
MCCD1P59942 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MCCD1P59942 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MCCD1P59942 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MCCD1P59942 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.1■□□□□ 0.65
MCCD1P59942 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MCCD1P59942 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MCCD1P59942 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MCCD1P59942 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.1■□□□□ 0.65
MCCD1P59942 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
MCCD1P59942 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.1■□□□□ 0.65
MCCD1P59942 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MCCD1P59942 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.09■□□□□ 0.65
MCCD1P59942 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.09■□□□□ 0.65
MCCD1P59942 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.09■□□□□ 0.65
MCCD1P59942 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MCCD1P59942 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.09■□□□□ 0.65
MCCD1P59942 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MCCD1P59942 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.09■□□□□ 0.65
MCCD1P59942 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.09■□□□□ 0.65
MCCD1P59942 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MCCD1P59942 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MCCD1P59942 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MCCD1P59942 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.09■□□□□ 0.65
MCCD1P59942 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MCCD1P59942 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MCCD1P59942 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.09■□□□□ 0.65
MCCD1P59942 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.09■□□□□ 0.65
MCCD1P59942 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MCCD1P59942 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
MCCD1P59942 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.09■□□□□ 0.65
MCCD1P59942 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.09■□□□□ 0.65
MCCD1P59942 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.09■□□□□ 0.65
MCCD1P59942 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MCCD1P59942 LYSMD4-203ENST00000378904 2122 ntBASIC19.09■□□□□ 0.65
MCCD1P59942 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
MCCD1P59942 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MCCD1P59942 AC016396.2-201ENST00000562575 1417 ntBASIC19.08■□□□□ 0.65
MCCD1P59942 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.08■□□□□ 0.65
MCCD1P59942 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MCCD1P59942 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MCCD1P59942 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MCCD1P59942 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
MCCD1P59942 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MCCD1P59942 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.08■□□□□ 0.64
MCCD1P59942 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
MCCD1P59942 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
MCCD1P59942 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.08■□□□□ 0.64
MCCD1P59942 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.08■□□□□ 0.64
MCCD1P59942 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.08■□□□□ 0.64
MCCD1P59942 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.08■□□□□ 0.64
MCCD1P59942 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.08■□□□□ 0.64
MCCD1P59942 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.08■□□□□ 0.64
MCCD1P59942 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
MCCD1P59942 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MCCD1P59942 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MCCD1P59942 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MCCD1P59942 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
MCCD1P59942 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.08■□□□□ 0.64
MCCD1P59942 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
MCCD1P59942 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.07■□□□□ 0.64
MCCD1P59942 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MCCD1P59942 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MCCD1P59942 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MCCD1P59942 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
MCCD1P59942 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.07■□□□□ 0.64
MCCD1P59942 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms