Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.67■□□□□ 0.74
PMS1P54277 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
PMS1P54277 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 CROCCP2-202ENST00000412962 2773 ntBASIC19.66■□□□□ 0.74
PMS1P54277 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PMS1P54277 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.66■□□□□ 0.74
PMS1P54277 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 AK4P3-201ENST00000418260 669 ntBASIC19.66■□□□□ 0.74
PMS1P54277 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.66■□□□□ 0.74
PMS1P54277 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.66■□□□□ 0.74
PMS1P54277 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.66■□□□□ 0.74
PMS1P54277 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.66■□□□□ 0.74
PMS1P54277 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.66■□□□□ 0.74
PMS1P54277 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PMS1P54277 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.66■□□□□ 0.74
PMS1P54277 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PMS1P54277 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
PMS1P54277 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.66■□□□□ 0.74
PMS1P54277 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PMS1P54277 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PMS1P54277 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PMS1P54277 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PMS1P54277 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PMS1P54277 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
PMS1P54277 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PMS1P54277 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.65■□□□□ 0.74
PMS1P54277 AP003733.1-201ENST00000491725 852 ntBASIC19.65■□□□□ 0.74
PMS1P54277 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.65■□□□□ 0.74
PMS1P54277 RNF126P1-202ENST00000569893 925 ntBASIC19.65■□□□□ 0.74
PMS1P54277 AC009154.2-201ENST00000621177 724 ntBASIC19.65■□□□□ 0.74
PMS1P54277 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PMS1P54277 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.65■□□□□ 0.74
PMS1P54277 PCDHA12-202ENST00000613593 2588 ntBASIC19.65■□□□□ 0.74
PMS1P54277 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.65■□□□□ 0.74
PMS1P54277 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PMS1P54277 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
PMS1P54277 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
PMS1P54277 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
PMS1P54277 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PMS1P54277 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PMS1P54277 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS1P54277 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS1P54277 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS1P54277 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PMS1P54277 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.64■□□□□ 0.73
PMS1P54277 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PMS1P54277 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.64■□□□□ 0.73
PMS1P54277 AC112698.1-201ENST00000510299 916 ntBASIC19.64■□□□□ 0.73
PMS1P54277 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.64■□□□□ 0.73
PMS1P54277 LINC01023-201ENST00000606054 436 ntBASIC19.64■□□□□ 0.73
PMS1P54277 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.64■□□□□ 0.73
PMS1P54277 AL353692.3-201ENST00000407031 1396 ntBASIC19.64■□□□□ 0.73
PMS1P54277 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS1P54277 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PMS1P54277 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.64■□□□□ 0.73
PMS1P54277 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.64■□□□□ 0.73
PMS1P54277 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.64■□□□□ 0.73
PMS1P54277 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PMS1P54277 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS1P54277 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PMS1P54277 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PMS1P54277 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS1P54277 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS1P54277 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS1P54277 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.63■□□□□ 0.73
PMS1P54277 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PMS1P54277 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.63■□□□□ 0.73
PMS1P54277 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PMS1P54277 HLA-J-201ENST00000462773 1622 ntBASIC19.63■□□□□ 0.73
PMS1P54277 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PMS1P54277 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PMS1P54277 AL138688.1-201ENST00000624851 1594 ntBASIC19.63■□□□□ 0.73
PMS1P54277 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms