Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.04■□□□□ 0.64
SSR1P43307 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SSR1P43307 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SSR1P43307 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.04■□□□□ 0.64
SSR1P43307 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SSR1P43307 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.04■□□□□ 0.64
SSR1P43307 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.04■□□□□ 0.64
SSR1P43307 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.04■□□□□ 0.64
SSR1P43307 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.04■□□□□ 0.64
SSR1P43307 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SSR1P43307 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SSR1P43307 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.04■□□□□ 0.64
SSR1P43307 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.04■□□□□ 0.64
SSR1P43307 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.04■□□□□ 0.64
SSR1P43307 AC012317.2-201ENST00000623305 2251 ntBASIC19.04■□□□□ 0.64
SSR1P43307 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SSR1P43307 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.04■□□□□ 0.64
SSR1P43307 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SSR1P43307 AC093010.1-201ENST00000473625 1624 ntBASIC19.03■□□□□ 0.64
SSR1P43307 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSR1P43307 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
SSR1P43307 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
SSR1P43307 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSR1P43307 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SSR1P43307 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSR1P43307 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.03■□□□□ 0.64
SSR1P43307 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 ECEL1P3-201ENST00000427961 737 ntBASIC19.03■□□□□ 0.64
SSR1P43307 LIN28AP1-201ENST00000429574 405 ntBASIC19.03■□□□□ 0.64
SSR1P43307 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.03■□□□□ 0.64
SSR1P43307 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.03■□□□□ 0.64
SSR1P43307 NEK4P2-201ENST00000580004 1012 ntBASIC19.03■□□□□ 0.64
SSR1P43307 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.03■□□□□ 0.64
SSR1P43307 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSR1P43307 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSR1P43307 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SSR1P43307 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSR1P43307 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSR1P43307 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSR1P43307 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSR1P43307 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SSR1P43307 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSR1P43307 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.02■□□□□ 0.64
SSR1P43307 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SSR1P43307 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SSR1P43307 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSR1P43307 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SSR1P43307 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSR1P43307 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.02■□□□□ 0.64
SSR1P43307 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSR1P43307 AP000523.1-201ENST00000398242 1049 ntBASIC19.02■□□□□ 0.64
SSR1P43307 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSR1P43307 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SSR1P43307 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.02■□□□□ 0.64
SSR1P43307 ATP5G1P1-201ENST00000448724 379 ntBASIC19.02■□□□□ 0.64
SSR1P43307 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.02■□□□□ 0.64
SSR1P43307 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.02■□□□□ 0.64
SSR1P43307 MIR3917-201ENST00000580971 93 ntBASIC19.02■□□□□ 0.64
SSR1P43307 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSR1P43307 AL157888.1-201ENST00000631930 593 ntBASIC19.02■□□□□ 0.64
SSR1P43307 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSR1P43307 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSR1P43307 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSR1P43307 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSR1P43307 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSR1P43307 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SSR1P43307 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.02■□□□□ 0.63
SSR1P43307 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.02■□□□□ 0.63
SSR1P43307 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.02■□□□□ 0.63
SSR1P43307 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSR1P43307 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SSR1P43307 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSR1P43307 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSR1P43307 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSR1P43307 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms