Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP11P24347 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP11P24347 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP11P24347 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP11P24347 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
MMP11P24347 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
MMP11P24347 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MMP11P24347 TSPY12P-201ENST00000421279 868 ntBASIC16.98■□□□□ 0.31
MMP11P24347 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.98■□□□□ 0.31
MMP11P24347 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.98■□□□□ 0.31
MMP11P24347 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.98■□□□□ 0.31
MMP11P24347 AP005901.3-202ENST00000581653 237 ntBASIC16.98■□□□□ 0.31
MMP11P24347 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP11P24347 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP11P24347 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP11P24347 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP11P24347 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP11P24347 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP11P24347 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP11P24347 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
MMP11P24347 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP11P24347 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MMP11P24347 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.97■□□□□ 0.31
MMP11P24347 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP11P24347 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MMP11P24347 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP11P24347 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP11P24347 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.97■□□□□ 0.31
MMP11P24347 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.97■□□□□ 0.31
MMP11P24347 MINOS1P3-201ENST00000457048 203 ntBASIC16.97■□□□□ 0.31
MMP11P24347 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.97■□□□□ 0.31
MMP11P24347 EMBP1-201ENST00000458200 901 ntBASIC16.97■□□□□ 0.31
MMP11P24347 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.97■□□□□ 0.31
MMP11P24347 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.97■□□□□ 0.31
MMP11P24347 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.97■□□□□ 0.31
MMP11P24347 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.97■□□□□ 0.31
MMP11P24347 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
MMP11P24347 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.97■□□□□ 0.31
MMP11P24347 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MMP11P24347 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MMP11P24347 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
MMP11P24347 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MMP11P24347 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
MMP11P24347 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
MMP11P24347 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
MMP11P24347 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.96■□□□□ 0.31
MMP11P24347 KRT16P4-201ENST00000453883 522 ntBASIC16.96■□□□□ 0.31
MMP11P24347 AC091607.1-201ENST00000490318 1060 ntBASIC16.96■□□□□ 0.31
MMP11P24347 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.96■□□□□ 0.31
MMP11P24347 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.96■□□□□ 0.31
MMP11P24347 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
MMP11P24347 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.96■□□□□ 0.31
MMP11P24347 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.96■□□□□ 0.31
MMP11P24347 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.96■□□□□ 0.31
MMP11P24347 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP11P24347 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.96■□□□□ 0.31
MMP11P24347 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MMP11P24347 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
MMP11P24347 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MMP11P24347 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.96■□□□□ 0.3
MMP11P24347 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MMP11P24347 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MMP11P24347 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.96■□□□□ 0.3
MMP11P24347 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
MMP11P24347 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MMP11P24347 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms