Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.68■□□□□ 0.9
ERCC3P19447 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.68■□□□□ 0.9
ERCC3P19447 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.68■□□□□ 0.9
ERCC3P19447 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.68■□□□□ 0.9
ERCC3P19447 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ERCC3P19447 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.68■□□□□ 0.9
ERCC3P19447 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ERCC3P19447 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.68■□□□□ 0.9
ERCC3P19447 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.68■□□□□ 0.9
ERCC3P19447 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
ERCC3P19447 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.68■□□□□ 0.9
ERCC3P19447 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERCC3P19447 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.67■□□□□ 0.9
ERCC3P19447 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC3P19447 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ERCC3P19447 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.67■□□□□ 0.9
ERCC3P19447 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC3P19447 AC021087.4-201ENST00000563761 564 ntBASIC20.67■□□□□ 0.9
ERCC3P19447 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC3P19447 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.67■□□□□ 0.9
ERCC3P19447 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.67■□□□□ 0.9
ERCC3P19447 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.67■□□□□ 0.9
ERCC3P19447 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ERCC3P19447 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ERCC3P19447 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ERCC3P19447 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
ERCC3P19447 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERCC3P19447 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.66■□□□□ 0.9
ERCC3P19447 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
ERCC3P19447 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ERCC3P19447 ABCD1P5-201ENST00000445663 754 ntBASIC20.66■□□□□ 0.9
ERCC3P19447 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 SART3-203ENST00000546611 1184 ntBASIC20.66■□□□□ 0.9
ERCC3P19447 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.66■□□□□ 0.9
ERCC3P19447 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.66■□□□□ 0.9
ERCC3P19447 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.66■□□□□ 0.9
ERCC3P19447 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ERCC3P19447 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ERCC3P19447 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERCC3P19447 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.66■□□□□ 0.9
ERCC3P19447 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ERCC3P19447 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ERCC3P19447 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC3P19447 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ERCC3P19447 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.65■□□□□ 0.9
ERCC3P19447 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC3P19447 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC3P19447 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ERCC3P19447 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC3P19447 RPS2P28-201ENST00000314255 741 ntBASIC20.65■□□□□ 0.9
ERCC3P19447 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC3P19447 MIR940-201ENST00000401276 94 ntBASIC20.65■□□□□ 0.9
ERCC3P19447 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.65■□□□□ 0.9
ERCC3P19447 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.65■□□□□ 0.9
ERCC3P19447 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.65■□□□□ 0.9
ERCC3P19447 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC3P19447 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC3P19447 AC018470.1-201ENST00000624790 3129 ntBASIC20.65■□□□□ 0.9
ERCC3P19447 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.65■□□□□ 0.9
ERCC3P19447 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC3P19447 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC3P19447 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC3P19447 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERCC3P19447 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ERCC3P19447 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.64■□□□□ 0.9
ERCC3P19447 ANO7L1-203ENST00000602586 1720 ntBASIC20.64■□□□□ 0.9
ERCC3P19447 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ERCC3P19447 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ERCC3P19447 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ERCC3P19447 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ERCC3P19447 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.64■□□□□ 0.9
ERCC3P19447 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms