Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRKCAP17252 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRKCAP17252 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRKCAP17252 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRKCAP17252 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.58■□□□□ 0.25
PRKCAP17252 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.58■□□□□ 0.25
PRKCAP17252 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.58■□□□□ 0.25
PRKCAP17252 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRKCAP17252 AL391807.1-203ENST00000604392 2365 ntBASIC16.58■□□□□ 0.25
PRKCAP17252 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PRKCAP17252 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRKCAP17252 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.58■□□□□ 0.25
PRKCAP17252 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRKCAP17252 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRKCAP17252 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PRKCAP17252 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRKCAP17252 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRKCAP17252 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.58■□□□□ 0.24
PRKCAP17252 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.58■□□□□ 0.24
PRKCAP17252 LINC01238-205ENST00000567549 1107 ntBASIC16.58■□□□□ 0.24
PRKCAP17252 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRKCAP17252 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.58■□□□□ 0.24
PRKCAP17252 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRKCAP17252 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PRKCAP17252 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRKCAP17252 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PRKCAP17252 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PRKCAP17252 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRKCAP17252 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRKCAP17252 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRKCAP17252 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRKCAP17252 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRKCAP17252 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRKCAP17252 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PRKCAP17252 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.58■□□□□ 0.24
PRKCAP17252 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.57■□□□□ 0.24
PRKCAP17252 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.57■□□□□ 0.24
PRKCAP17252 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
PRKCAP17252 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.57■□□□□ 0.24
PRKCAP17252 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PRKCAP17252 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PRKCAP17252 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.57■□□□□ 0.24
PRKCAP17252 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 AC112907.2-201ENST00000448639 330 ntBASIC16.57■□□□□ 0.24
PRKCAP17252 AC092597.1-201ENST00000487352 616 ntBASIC16.57■□□□□ 0.24
PRKCAP17252 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.57■□□□□ 0.24
PRKCAP17252 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PRKCAP17252 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.57■□□□□ 0.24
PRKCAP17252 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.57■□□□□ 0.24
PRKCAP17252 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.57■□□□□ 0.24
PRKCAP17252 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.57■□□□□ 0.24
PRKCAP17252 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.57■□□□□ 0.24
PRKCAP17252 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.57■□□□□ 0.24
PRKCAP17252 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRKCAP17252 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PRKCAP17252 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.56■□□□□ 0.24
PRKCAP17252 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRKCAP17252 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRKCAP17252 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PRKCAP17252 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
PRKCAP17252 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.56■□□□□ 0.24
PRKCAP17252 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.56■□□□□ 0.24
PRKCAP17252 HLA-F-220ENST00000434407 884 ntBASIC16.56■□□□□ 0.24
PRKCAP17252 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 AL049597.2-201ENST00000565575 961 ntBASIC16.56■□□□□ 0.24
PRKCAP17252 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.56■□□□□ 0.24
PRKCAP17252 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.56■□□□□ 0.24
PRKCAP17252 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.56■□□□□ 0.24
PRKCAP17252 HYMAI.1-201ENST00000620949 238 ntBASIC16.56■□□□□ 0.24
PRKCAP17252 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms