Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
UBL4AP11441 NOC2LP2-201ENST00000407594 1944 ntBASIC16.57■□□□□ 0.24
UBL4AP11441 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UBL4AP11441 AC132938.6-201ENST00000623828 1655 ntBASIC16.57■□□□□ 0.24
UBL4AP11441 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 LINC00167-201ENST00000530583 1419 ntBASIC16.57■□□□□ 0.24
UBL4AP11441 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.57■□□□□ 0.24
UBL4AP11441 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.57■□□□□ 0.24
UBL4AP11441 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UBL4AP11441 SLC25A6P5-201ENST00000435663 894 ntBASIC16.57■□□□□ 0.24
UBL4AP11441 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.57■□□□□ 0.24
UBL4AP11441 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.57■□□□□ 0.24
UBL4AP11441 ZNF444P1-201ENST00000559497 298 ntBASIC16.57■□□□□ 0.24
UBL4AP11441 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.57■□□□□ 0.24
UBL4AP11441 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.57■□□□□ 0.24
UBL4AP11441 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.57■□□□□ 0.24
UBL4AP11441 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.57■□□□□ 0.24
UBL4AP11441 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
UBL4AP11441 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.57■□□□□ 0.24
UBL4AP11441 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.57■□□□□ 0.24
UBL4AP11441 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.57■□□□□ 0.24
UBL4AP11441 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.57■□□□□ 0.24
UBL4AP11441 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 LINC00602-201ENST00000629776 2065 ntBASIC16.57■□□□□ 0.24
UBL4AP11441 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.57■□□□□ 0.24
UBL4AP11441 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UBL4AP11441 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.56■□□□□ 0.24
UBL4AP11441 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UBL4AP11441 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.56■□□□□ 0.24
UBL4AP11441 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UBL4AP11441 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.56■□□□□ 0.24
UBL4AP11441 LINC01311-201ENST00000565162 1445 ntBASIC16.56■□□□□ 0.24
UBL4AP11441 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
UBL4AP11441 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UBL4AP11441 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.56■□□□□ 0.24
UBL4AP11441 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
UBL4AP11441 HBZP1-201ENST00000354915 429 ntBASIC16.56■□□□□ 0.24
UBL4AP11441 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.56■□□□□ 0.24
UBL4AP11441 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.56■□□□□ 0.24
UBL4AP11441 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.56■□□□□ 0.24
UBL4AP11441 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
UBL4AP11441 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.56■□□□□ 0.24
UBL4AP11441 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.56■□□□□ 0.24
UBL4AP11441 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.56■□□□□ 0.24
UBL4AP11441 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
UBL4AP11441 AL162727.3-201ENST00000635661 2787 ntBASIC16.56■□□□□ 0.24
UBL4AP11441 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.56■□□□□ 0.24
UBL4AP11441 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.56■□□□□ 0.24
UBL4AP11441 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBL4AP11441 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.56■□□□□ 0.24
UBL4AP11441 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
UBL4AP11441 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UBL4AP11441 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 AC008764.6-201ENST00000595909 2069 ntBASIC16.55■□□□□ 0.24
UBL4AP11441 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.55■□□□□ 0.24
UBL4AP11441 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBL4AP11441 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms