Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 CICP6-201ENST00000457191 2729 ntBASIC13.02□□□□□ -0.33
TNFRSF6BO95407 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFRSF6BO95407 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFRSF6BO95407 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13□□□□□ -0.33
TNFRSF6BO95407 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13□□□□□ -0.33
TNFRSF6BO95407 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TNFRSF6BO95407 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TNFRSF6BO95407 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 MIR149-201ENST00000384879 89 ntBASIC13□□□□□ -0.33
TNFRSF6BO95407 MIR663A-201ENST00000385250 93 ntBASIC13□□□□□ -0.33
TNFRSF6BO95407 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TNFRSF6BO95407 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13□□□□□ -0.33
TNFRSF6BO95407 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13□□□□□ -0.33
TNFRSF6BO95407 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13□□□□□ -0.33
TNFRSF6BO95407 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TNFRSF6BO95407 AGGF1P2-201ENST00000426656 2106 ntBASIC13□□□□□ -0.33
TNFRSF6BO95407 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TNFRSF6BO95407 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TNFRSF6BO95407 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.99□□□□□ -0.33
TNFRSF6BO95407 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFRSF6BO95407 AL162727.3-201ENST00000635661 2787 ntBASIC12.99□□□□□ -0.33
TNFRSF6BO95407 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFRSF6BO95407 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TNFRSF6BO95407 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.99□□□□□ -0.33
TNFRSF6BO95407 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms