Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.32■■□□□ 1
MBD4O95243 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.32■■□□□ 1
MBD4O95243 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
MBD4O95243 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
MBD4O95243 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
MBD4O95243 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.31■■□□□ 1
MBD4O95243 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.31■■□□□ 1
MBD4O95243 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 FAM220CP-201ENST00000395253 831 ntBASIC21.31■■□□□ 1
MBD4O95243 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
MBD4O95243 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.31■■□□□ 1
MBD4O95243 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.31■■□□□ 1
MBD4O95243 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.31■■□□□ 1
MBD4O95243 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.31■■□□□ 1
MBD4O95243 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
MBD4O95243 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.31■■□□□ 1
MBD4O95243 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.31■■□□□ 1
MBD4O95243 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD4O95243 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
MBD4O95243 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.31■■□□□ 1
MBD4O95243 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.3■■□□□ 1
MBD4O95243 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MBD4O95243 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MBD4O95243 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.3■■□□□ 1
MBD4O95243 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.3■■□□□ 1
MBD4O95243 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MBD4O95243 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.3■■□□□ 1
MBD4O95243 KRT18P55-202ENST00000578578 1546 ntBASIC21.3■■□□□ 1
MBD4O95243 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
MBD4O95243 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.3■■□□□ 1
MBD4O95243 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
MBD4O95243 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
MBD4O95243 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
MBD4O95243 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.3■■□□□ 1
MBD4O95243 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.3■■□□□ 1
MBD4O95243 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.3■■□□□ 1
MBD4O95243 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.3■■□□□ 1
MBD4O95243 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.3■■□□□ 1
MBD4O95243 AP001269.4-201ENST00000609611 512 ntBASIC21.3■■□□□ 1
MBD4O95243 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.3■■□□□ 1
MBD4O95243 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
MBD4O95243 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MBD4O95243 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.3■■□□□ 1
MBD4O95243 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.3■■□□□ 1
MBD4O95243 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.3■■□□□ 1
MBD4O95243 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
MBD4O95243 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.29■■□□□ 1
MBD4O95243 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.29■■□□□ 1
MBD4O95243 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.29■■□□□ 1
MBD4O95243 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
MBD4O95243 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.29■■□□□ 1
MBD4O95243 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
MBD4O95243 AC104692.2-201ENST00000603054 253 ntBASIC21.29■■□□□ 1
MBD4O95243 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.29■■□□□ 1
MBD4O95243 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.29■■□□□ 1
MBD4O95243 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
MBD4O95243 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD4O95243 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MBD4O95243 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MBD4O95243 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.28■■□□□ 1
MBD4O95243 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.28■■□□□ 1
MBD4O95243 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
MBD4O95243 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.28■■□□□ 1
MBD4O95243 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
MBD4O95243 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.28■■□□□ 1
MBD4O95243 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.28■■□□□ 1
MBD4O95243 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.28■■□□□ 1
MBD4O95243 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MBD4O95243 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
MBD4O95243 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MBD4O95243 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.28■■□□□ 1
MBD4O95243 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.28■■□□□ 1
MBD4O95243 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms