Protein–RNA interactions for Protein: O60292

SIPA1L3, Signal-induced proliferation-associated 1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3O60292 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIPA1L3O60292 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
SIPA1L3O60292 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.72■■□□□ 1.23
SIPA1L3O60292 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.72■■□□□ 1.23
SIPA1L3O60292 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIPA1L3O60292 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.72■■□□□ 1.23
SIPA1L3O60292 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
SIPA1L3O60292 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.72■■□□□ 1.23
SIPA1L3O60292 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIPA1L3O60292 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIPA1L3O60292 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIPA1L3O60292 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
SIPA1L3O60292 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIPA1L3O60292 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.72■■□□□ 1.23
SIPA1L3O60292 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIPA1L3O60292 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
SIPA1L3O60292 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
SIPA1L3O60292 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SIPA1L3O60292 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SIPA1L3O60292 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 KRT18P55-202ENST00000578578 1546 ntBASIC22.71■■□□□ 1.23
SIPA1L3O60292 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SIPA1L3O60292 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SIPA1L3O60292 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SIPA1L3O60292 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.71■■□□□ 1.23
SIPA1L3O60292 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.71■■□□□ 1.23
SIPA1L3O60292 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SIPA1L3O60292 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
SIPA1L3O60292 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SIPA1L3O60292 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIPA1L3O60292 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SIPA1L3O60292 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SIPA1L3O60292 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SIPA1L3O60292 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.7■■□□□ 1.22
SIPA1L3O60292 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIPA1L3O60292 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
SIPA1L3O60292 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIPA1L3O60292 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.7■■□□□ 1.22
SIPA1L3O60292 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.7■■□□□ 1.22
SIPA1L3O60292 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIPA1L3O60292 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.7■■□□□ 1.22
SIPA1L3O60292 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIPA1L3O60292 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIPA1L3O60292 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.7■■□□□ 1.22
SIPA1L3O60292 RPS15P9-201ENST00000494093 319 ntBASIC22.7■■□□□ 1.22
SIPA1L3O60292 AC002347.1-201ENST00000569543 541 ntBASIC22.7■■□□□ 1.22
SIPA1L3O60292 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.7■■□□□ 1.22
SIPA1L3O60292 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SIPA1L3O60292 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.7■■□□□ 1.22
SIPA1L3O60292 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SIPA1L3O60292 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.7■■□□□ 1.22
SIPA1L3O60292 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SIPA1L3O60292 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.69■■□□□ 1.22
SIPA1L3O60292 HCG4B-203ENST00000450128 991 ntBASIC22.69■■□□□ 1.22
SIPA1L3O60292 AC018845.2-201ENST00000568326 409 ntBASIC22.69■■□□□ 1.22
SIPA1L3O60292 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.69■■□□□ 1.22
SIPA1L3O60292 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIPA1L3O60292 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIPA1L3O60292 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIPA1L3O60292 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
SIPA1L3O60292 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIPA1L3O60292 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.69■■□□□ 1.22
SIPA1L3O60292 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SIPA1L3O60292 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 KRT18P2-201ENST00000447938 1258 ntBASIC22.68■■□□□ 1.22
SIPA1L3O60292 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 AC116407.2-201ENST00000613639 860 ntBASIC22.68■■□□□ 1.22
SIPA1L3O60292 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SIPA1L3O60292 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SIPA1L3O60292 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SIPA1L3O60292 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
SIPA1L3O60292 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SIPA1L3O60292 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
SIPA1L3O60292 AC009113.1-201ENST00000570267 2443 ntBASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms