Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPB9F8W1W9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.33■□□□□ 0.21
NPIPB9F8W1W9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.21
NPIPB9F8W1W9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPB9F8W1W9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.33■□□□□ 0.21
NPIPB9F8W1W9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPB9F8W1W9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 AC005104.2-201ENST00000427818 678 ntBASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 CHCHD2P8-201ENST00000429873 447 ntBASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 KRT18P35-201ENST00000510488 1269 ntBASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 AC124864.1-201ENST00000623408 392 ntBASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 BX276092.7-203ENST00000637198 1536 ntBASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 HLA-J-201ENST00000462773 1622 ntBASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NPIPB9F8W1W9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 AC125634.1-201ENST00000438758 1403 ntBASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 BX276092.5-203ENST00000456199 560 ntBASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 AC005336.2-201ENST00000593183 939 ntBASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 IGHV3-41-201ENST00000613121 348 ntBASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB9F8W1W9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 AC010460.3-201ENST00000511359 1579 ntBASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 IER3-202ENST00000376377 1350 ntBASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 AC246785.2-201ENST00000432512 513 ntBASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 AL138831.2-201ENST00000606564 490 ntBASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 AP000550.4-202ENST00000639755 178 ntBASIC16.31■□□□□ 0.2
NPIPB9F8W1W9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms