Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX9Q9Y5X1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 KRT18P31-201ENST00000506277 1292 ntBASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 AC091304.2-201ENST00000564639 760 ntBASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 AL354751.1-201ENST00000412768 1863 ntBASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX9Q9Y5X1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
SNX9Q9Y5X1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.14■□□□□ 0.66
SNX9Q9Y5X1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 POM121L3P-201ENST00000419331 1163 ntBASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 TP73-AS1-210ENST00000637775 1455 ntBASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 FLJ13224-201ENST00000313737 1514 ntBASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 AC138028.4-201ENST00000564984 1845 ntBASIC19.14■□□□□ 0.65
SNX9Q9Y5X1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 UNC93B7-201ENST00000509439 705 ntBASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 AC009533.2-201ENST00000543664 586 ntBASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX9Q9Y5X1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SNX9Q9Y5X1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms