Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 RNF126P1-202ENST00000569893 925 ntBASIC15.49■□□□□ 0.07
TREM2Q9NZC2 AC011498.5-201ENST00000592027 486 ntBASIC15.49■□□□□ 0.07
TREM2Q9NZC2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 SDHAP2-201ENST00000455183 2001 ntBASIC15.49■□□□□ 0.07
TREM2Q9NZC2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 AC009053.2-201ENST00000563701 2365 ntBASIC15.49■□□□□ 0.07
TREM2Q9NZC2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TREM2Q9NZC2 AC135776.1-201ENST00000319817 2481 ntBASIC15.49■□□□□ 0.07
TREM2Q9NZC2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 AC046158.3-201ENST00000624947 2558 ntBASIC15.48■□□□□ 0.07
TREM2Q9NZC2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 MIR149-201ENST00000384879 89 ntBASIC15.48■□□□□ 0.07
TREM2Q9NZC2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 KRT126P-201ENST00000549467 1181 ntBASIC15.48■□□□□ 0.07
TREM2Q9NZC2 AC009065.1-201ENST00000564055 1225 ntBASIC15.48■□□□□ 0.07
TREM2Q9NZC2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 CLEC4GP1-201ENST00000596555 870 ntBASIC15.48■□□□□ 0.07
TREM2Q9NZC2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 AC092119.3-201ENST00000612618 583 ntBASIC15.48■□□□□ 0.07
TREM2Q9NZC2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TREM2Q9NZC2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 AP003733.1-201ENST00000491725 852 ntBASIC15.47■□□□□ 0.07
TREM2Q9NZC2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 MIR3180-4-201ENST00000582223 153 ntBASIC15.47■□□□□ 0.07
TREM2Q9NZC2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.47■□□□□ 0.07
TREM2Q9NZC2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms