Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 AC116407.2-201ENST00000613639 860 ntBASIC16.66■□□□□ 0.26
POLE3Q9NRF9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.66■□□□□ 0.26
POLE3Q9NRF9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 AC211429.1-201ENST00000415277 523 ntBASIC16.65■□□□□ 0.26
POLE3Q9NRF9 TSPY5P-201ENST00000426936 936 ntBASIC16.65■□□□□ 0.26
POLE3Q9NRF9 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 LINC00602-201ENST00000629776 2065 ntBASIC16.65■□□□□ 0.26
POLE3Q9NRF9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLE3Q9NRF9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.64■□□□□ 0.26
POLE3Q9NRF9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
POLE3Q9NRF9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
POLE3Q9NRF9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
POLE3Q9NRF9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.64■□□□□ 0.25
POLE3Q9NRF9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms