Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 AC007663.1-201ENST00000438948 1240 ntBASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.46■□□□□ 0.23
KRCC1Q9NPI7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.46■□□□□ 0.22
KRCC1Q9NPI7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.46■□□□□ 0.22
KRCC1Q9NPI7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
KRCC1Q9NPI7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 AC092865.7-201ENST00000641832 219 ntBASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
KRCC1Q9NPI7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 AP000525.1-201ENST00000608286 694 ntBASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRCC1Q9NPI7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRCC1Q9NPI7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms