Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 AC006449.6-201ENST00000612330 2296 ntBASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 SDHAP1-207ENST00000440850 2000 ntBASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 AC006504.5-208ENST00000588784 2401 ntBASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC10.34□□□□□ -0.75
CYSTM1Q9H1C7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC10.33□□□□□ -0.75
CYSTM1Q9H1C7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC10.33□□□□□ -0.76
CYSTM1Q9H1C7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms