Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PACSIN1Q9BY11 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PACSIN1Q9BY11 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PACSIN1Q9BY11 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.06■□□□□ 0.64
PACSIN1Q9BY11 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 KRT8P47-201ENST00000604727 1398 ntBASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 LINC01568-207ENST00000641790 1380 ntBASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PACSIN1Q9BY11 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 AC022898.2-201ENST00000616822 1312 ntBASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 AL596275.1-201ENST00000423464 877 ntBASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 AD000864.1-201ENST00000624076 2295 ntBASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PACSIN1Q9BY11 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 AL512604.3-201ENST00000569583 964 ntBASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 AC079602.3-201ENST00000623931 403 ntBASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 AC141257.4-201ENST00000634557 245 ntBASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 AC136944.6-201ENST00000634818 245 ntBASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.03■□□□□ 0.64
PACSIN1Q9BY11 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PACSIN1Q9BY11 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms