Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.11■□□□□ 0.33
CMKLR1Q99788 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.11■□□□□ 0.33
CMKLR1Q99788 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CMKLR1Q99788 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.11■□□□□ 0.33
CMKLR1Q99788 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.11■□□□□ 0.33
CMKLR1Q99788 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.11■□□□□ 0.33
CMKLR1Q99788 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.11■□□□□ 0.33
CMKLR1Q99788 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.11■□□□□ 0.33
CMKLR1Q99788 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMKLR1Q99788 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CMKLR1Q99788 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CMKLR1Q99788 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.1■□□□□ 0.33
CMKLR1Q99788 FAM220CP-201ENST00000395253 831 ntBASIC17.1■□□□□ 0.33
CMKLR1Q99788 BX842568.4-201ENST00000421222 227 ntBASIC17.1■□□□□ 0.33
CMKLR1Q99788 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.1■□□□□ 0.33
CMKLR1Q99788 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.1■□□□□ 0.33
CMKLR1Q99788 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CMKLR1Q99788 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.1■□□□□ 0.33
CMKLR1Q99788 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.1■□□□□ 0.33
CMKLR1Q99788 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 GMCL1P1-201ENST00000463439 1581 ntBASIC17.1■□□□□ 0.33
CMKLR1Q99788 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.1■□□□□ 0.33
CMKLR1Q99788 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CMKLR1Q99788 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CMKLR1Q99788 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMKLR1Q99788 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CMKLR1Q99788 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CMKLR1Q99788 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CMKLR1Q99788 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.09■□□□□ 0.33
CMKLR1Q99788 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.09■□□□□ 0.33
CMKLR1Q99788 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.09■□□□□ 0.33
CMKLR1Q99788 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.09■□□□□ 0.33
CMKLR1Q99788 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CMKLR1Q99788 AC145285.3-201ENST00000564603 959 ntBASIC17.09■□□□□ 0.33
CMKLR1Q99788 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CMKLR1Q99788 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 AC027601.4-201ENST00000611259 610 ntBASIC17.09■□□□□ 0.33
CMKLR1Q99788 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
CMKLR1Q99788 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 AC104109.2-201ENST00000602919 1418 ntBASIC17.09■□□□□ 0.33
CMKLR1Q99788 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CMKLR1Q99788 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.09■□□□□ 0.33
CMKLR1Q99788 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CMKLR1Q99788 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CMKLR1Q99788 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CMKLR1Q99788 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CMKLR1Q99788 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CMKLR1Q99788 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CMKLR1Q99788 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CMKLR1Q99788 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.08■□□□□ 0.33
CMKLR1Q99788 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.08■□□□□ 0.33
CMKLR1Q99788 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.08■□□□□ 0.33
CMKLR1Q99788 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CMKLR1Q99788 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CMKLR1Q99788 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CMKLR1Q99788 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CMKLR1Q99788 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.08■□□□□ 0.32
CMKLR1Q99788 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms