Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC069120.2-201ENST00000524091 540 ntBASIC5.39□□□□□ -1.55
HMCN1Q96RW7 CHCHD2P3-201ENST00000603038 451 ntBASIC5.39□□□□□ -1.55
HMCN1Q96RW7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 RPL17P11-201ENST00000417593 544 ntBASIC5.39□□□□□ -1.55
HMCN1Q96RW7 AC026954.1-201ENST00000429771 1293 ntBASIC5.39□□□□□ -1.55
HMCN1Q96RW7 RN7SL837P-201ENST00000463010 287 ntBASIC5.39□□□□□ -1.55
HMCN1Q96RW7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 SPDYE12P-201ENST00000618416 771 ntBASIC5.39□□□□□ -1.55
HMCN1Q96RW7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ZNF815P-204ENST00000434898 1737 ntBASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 C2orf69P2-201ENST00000562032 1123 ntBASIC5.39□□□□□ -1.55
HMCN1Q96RW7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 CD7-202ENST00000578509 925 ntTSL 3 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 UXT-AS1-201ENST00000590504 1525 ntBASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 CD81-202ENST00000381036 880 ntTSL 3 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMCN1Q96RW7 AL023806.1-201ENST00000603994 1649 ntBASIC5.39□□□□□ -1.55
HMCN1Q96RW7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 AC007225.1-201ENST00000566331 1836 ntBASIC5.38□□□□□ -1.55
HMCN1Q96RW7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 AGER-203ENST00000375065 665 ntTSL 2 BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 AC114501.2-201ENST00000439631 535 ntBASIC5.38□□□□□ -1.55
HMCN1Q96RW7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 AC114501.1-201ENST00000445949 172 ntBASIC5.38□□□□□ -1.55
HMCN1Q96RW7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC5.38□□□□□ -1.55
HMCN1Q96RW7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms