Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 NUS1P1-201ENST00000446295 882 ntBASIC18.45■□□□□ 0.54
RPRD1AQ96P16 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 FOSL1P1-201ENST00000511041 816 ntBASIC18.45■□□□□ 0.54
RPRD1AQ96P16 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 AC138894.3-201ENST00000603787 634 ntBASIC18.45■□□□□ 0.54
RPRD1AQ96P16 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
RPRD1AQ96P16 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 AC138028.4-201ENST00000564984 1845 ntBASIC18.44■□□□□ 0.54
RPRD1AQ96P16 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 DUSP5P1-201ENST00000441325 1139 ntBASIC18.44■□□□□ 0.54
RPRD1AQ96P16 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.44■□□□□ 0.54
RPRD1AQ96P16 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPRD1AQ96P16 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 KRT8P47-201ENST00000604727 1398 ntBASIC18.43■□□□□ 0.54
RPRD1AQ96P16 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 AC100803.2-201ENST00000562459 1963 ntBASIC18.43■□□□□ 0.54
RPRD1AQ96P16 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RPRD1AQ96P16 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPRD1AQ96P16 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
RPRD1AQ96P16 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPRD1AQ96P16 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.42■□□□□ 0.54
RPRD1AQ96P16 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPRD1AQ96P16 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPRD1AQ96P16 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms