Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC1Q92922 AC003669.1-201ENST00000334569 611 ntBASIC22.78■■□□□ 1.24
SMARCC1Q92922 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC1Q92922 S100A2-206ENST00000497140 697 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC1Q92922 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC1Q92922 AC092364.2-202ENST00000597012 1073 ntBASIC22.78■■□□□ 1.24
SMARCC1Q92922 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.78■■□□□ 1.24
SMARCC1Q92922 AC010654.1-201ENST00000615722 808 ntBASIC22.78■■□□□ 1.24
SMARCC1Q92922 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.78■■□□□ 1.24
SMARCC1Q92922 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC1Q92922 AC148477.5-201ENST00000625164 1645 ntBASIC22.78■■□□□ 1.24
SMARCC1Q92922 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC1Q92922 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC1Q92922 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SMARCC1Q92922 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.78■■□□□ 1.24
SMARCC1Q92922 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC1Q92922 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC1Q92922 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC1Q92922 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC1Q92922 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SMARCC1Q92922 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMARCC1Q92922 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC22.77■■□□□ 1.24
SMARCC1Q92922 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMARCC1Q92922 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMARCC1Q92922 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMARCC1Q92922 KLF4P1-201ENST00000412782 1185 ntBASIC22.77■■□□□ 1.24
SMARCC1Q92922 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC22.77■■□□□ 1.24
SMARCC1Q92922 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
SMARCC1Q92922 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.77■■□□□ 1.24
SMARCC1Q92922 PDPK2P-202ENST00000562415 1191 ntBASIC22.77■■□□□ 1.24
SMARCC1Q92922 AL805961.1-202ENST00000641562 540 ntBASIC22.77■■□□□ 1.24
SMARCC1Q92922 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMARCC1Q92922 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC22.77■■□□□ 1.24
SMARCC1Q92922 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
SMARCC1Q92922 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC1Q92922 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC1Q92922 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 MRPL20P1-201ENST00000400819 433 ntBASIC22.76■■□□□ 1.23
SMARCC1Q92922 IGLL3P-201ENST00000412472 434 ntBASIC22.76■■□□□ 1.23
SMARCC1Q92922 FAM8A3P-201ENST00000427218 844 ntBASIC22.76■■□□□ 1.23
SMARCC1Q92922 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC1Q92922 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC1Q92922 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC1Q92922 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC1Q92922 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC1Q92922 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC1Q92922 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC1Q92922 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.76■■□□□ 1.23
SMARCC1Q92922 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC1Q92922 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC1Q92922 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC1Q92922 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC1Q92922 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC1Q92922 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC1Q92922 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC1Q92922 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC1Q92922 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 AC096734.2-201ENST00000562054 433 ntBASIC22.75■■□□□ 1.23
SMARCC1Q92922 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC1Q92922 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
SMARCC1Q92922 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC1Q92922 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.74■■□□□ 1.23
SMARCC1Q92922 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.74■■□□□ 1.23
SMARCC1Q92922 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.74■■□□□ 1.23
SMARCC1Q92922 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.74■■□□□ 1.23
SMARCC1Q92922 FUT8-AS1-201ENST00000621019 1521 ntBASIC22.74■■□□□ 1.23
SMARCC1Q92922 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC1Q92922 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
SMARCC1Q92922 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC1Q92922 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC1Q92922 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC1Q92922 MIR770-201ENST00000390219 98 ntBASIC22.74■■□□□ 1.23
SMARCC1Q92922 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms