Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
RTF1Q92541 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RTF1Q92541 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RTF1Q92541 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.3■■□□□ 1.32
RTF1Q92541 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.3■■□□□ 1.32
RTF1Q92541 KRT18P67-201ENST00000432816 1264 ntBASIC23.3■■□□□ 1.32
RTF1Q92541 SCARNA2-201ENST00000458748 420 ntBASIC23.3■■□□□ 1.32
RTF1Q92541 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.3■■□□□ 1.32
RTF1Q92541 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.3■■□□□ 1.32
RTF1Q92541 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.3■■□□□ 1.32
RTF1Q92541 AC104581.1-202ENST00000635932 2618 ntBASIC23.3■■□□□ 1.32
RTF1Q92541 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RTF1Q92541 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
RTF1Q92541 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTF1Q92541 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC23.3■■□□□ 1.32
RTF1Q92541 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC23.3■■□□□ 1.32
RTF1Q92541 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RTF1Q92541 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC23.29■■□□□ 1.32
RTF1Q92541 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
RTF1Q92541 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTF1Q92541 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTF1Q92541 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTF1Q92541 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTF1Q92541 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTF1Q92541 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.29■■□□□ 1.32
RTF1Q92541 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
RTF1Q92541 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.29■■□□□ 1.32
RTF1Q92541 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC23.29■■□□□ 1.32
RTF1Q92541 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RTF1Q92541 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC23.29■■□□□ 1.32
RTF1Q92541 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.29■■□□□ 1.32
RTF1Q92541 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC23.29■■□□□ 1.32
RTF1Q92541 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.29■■□□□ 1.32
RTF1Q92541 AL773604.1-201ENST00000617417 272 ntBASIC23.29■■□□□ 1.32
RTF1Q92541 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RTF1Q92541 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTF1Q92541 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
RTF1Q92541 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTF1Q92541 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.29■■□□□ 1.32
RTF1Q92541 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.29■■□□□ 1.32
RTF1Q92541 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTF1Q92541 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.28■■□□□ 1.32
RTF1Q92541 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23.28■■□□□ 1.32
RTF1Q92541 AC073648.2-201ENST00000510116 352 ntBASIC23.28■■□□□ 1.32
RTF1Q92541 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
RTF1Q92541 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC23.28■■□□□ 1.32
RTF1Q92541 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
RTF1Q92541 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTF1Q92541 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTF1Q92541 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTF1Q92541 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC23.27■■□□□ 1.32
RTF1Q92541 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC23.27■■□□□ 1.32
RTF1Q92541 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RTF1Q92541 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.27■■□□□ 1.32
RTF1Q92541 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTF1Q92541 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
RTF1Q92541 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTF1Q92541 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTF1Q92541 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23.27■■□□□ 1.32
RTF1Q92541 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTF1Q92541 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.27■■□□□ 1.32
RTF1Q92541 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC23.27■■□□□ 1.32
RTF1Q92541 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.27■■□□□ 1.32
RTF1Q92541 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTF1Q92541 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC23.27■■□□□ 1.32
RTF1Q92541 AC122714.2-201ENST00000502787 707 ntBASIC23.27■■□□□ 1.32
RTF1Q92541 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.27■■□□□ 1.32
RTF1Q92541 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.27■■□□□ 1.32
RTF1Q92541 AP001005.1-201ENST00000571755 1248 ntBASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms