Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 AC093827.2-201ENST00000512654 315 ntBASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 AC092865.7-201ENST00000641832 219 ntBASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLHC1Q8NHS4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 ECEL1P3-201ENST00000427961 737 ntBASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 AC080080.1-201ENST00000625121 2420 ntBASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLHC1Q8NHS4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
CLHC1Q8NHS4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.21■□□□□ 0.34
CLHC1Q8NHS4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 LINC00602-201ENST00000629776 2065 ntBASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 AL512604.3-201ENST00000569583 964 ntBASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 NEK4P2-201ENST00000580004 1012 ntBASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 AC108860.2-201ENST00000562760 2183 ntBASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLHC1Q8NHS4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms