Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
ARHGEF39Q8N4T4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 AC120498.9-201ENST00000339021 3867 ntBASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 AC009949.1-201ENST00000623048 1830 ntBASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 COX5BP2-201ENST00000392354 334 ntBASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.87■□□□□ 0.29
ARHGEF39Q8N4T4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 DDX43P3-201ENST00000441064 443 ntBASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 AC122714.2-201ENST00000502787 707 ntBASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 AC111152.3-201ENST00000569699 673 ntBASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 RN7SL510P-201ENST00000581311 263 ntBASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 REXO1L6P-202ENST00000619970 1078 ntBASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 AL691432.3-201ENST00000621860 400 ntBASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ARHGEF39Q8N4T4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms