Protein–RNA interactions for Protein: Q5VVW2

GARNL3, GTPase-activating Rap/Ran-GAP domain-like protein 3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3Q5VVW2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 PRELID1P1-202ENST00000567272 903 ntBASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.05■□□□□ 0.32
GARNL3Q5VVW2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 POM121L3P-201ENST00000419331 1163 ntBASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GARNL3Q5VVW2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 NSUN5P1-202ENST00000421140 1535 ntBASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 NSUN5P2-203ENST00000457352 1529 ntBASIC17.03■□□□□ 0.32
GARNL3Q5VVW2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms